Cambridge, Massachusetts, United States · On-site
$108k–$171k/yr
What if you could join a rapidly growing company and play a critical role in bringing new medicines to patients by helping scale the programmable infrastructure behind a new human cellular biology platform? About Vesaliu…
Skills: Python, C#, Laboratory automation, Robotics, Liquid handling
Cambridge, Massachusetts, United States · On-site
$179k–$236k/yr
About Pioneering Intelligence Pioneering Intelligence builds on Flagship Pioneering’s legacy of founding cutting-edge science and computational ventures, harnessing recent advances in AI, machine learning, and data to ac…
Skills: Clinical Pipeline Strategy, Commercial Strategy, LLM Prompting, Agentic Workflows, Translational Medicine
Cambridge, Massachusetts, United States · Hybrid
$172k–$237k/yr
What if... We could harness the power of Flagship’s scientific platforms and create novel treatment options that benefit more patients, sooner? About Pioneering Medicines: Pioneering Medicines, Flagship Pioneering’s in-h…
Skills: In vivo pharmacology, Metabolic disease, Obesity research, PK/PD assessment, Drug discovery
Cambridge, Massachusetts, United States · On-site
$108k–$209k/yr
The Company FL105 is a privately held, early-stage company pioneering the use of artificial intelligence to transform human psychological fitness and wellbeing. We are creating a platform that empowers people to build a …
Skills: Software development, Python, AWS, Cloud infrastructure, System architecture
Cambridge, Massachusetts, United States · On-site
$176k–$294k/yr
COMPANY DESCRIPTION Flagship Labs 111 Inc. (FL111) is a privately held, early-stage biotechnology company pioneering a novel platform harnessing innovations in chemistry, computation, and data science to create new thera…
Skills: Computational chemistry, Medicinal chemistry, Structure-based drug design, Cheminformatics, Molecular design
Cambridge, Massachusetts, United States · On-site
$126k–$182k/yr
What if… you could join an organization that creates, resources, and builds life sciences companies that invent breakthrough technologies in order to transform health care and sustainability? Flagship Labs 129 (FL129) is…
Skills: Molecular Biology, Small Molecule Screening, Protein Target Display, Yeast Surface Display, Genomics
Cambridge, Massachusetts, United States · On-site
Position Summary: This role will partner closely with Quotient’s drug development project leaders and matrix teams to translate their scientific strategy into robust, integrated drug development project plans, and drive …
Skills: Project Management, Drug Development, Pipeline Strategy, Matrix Team Leadership, Risk Management
Cambridge, Massachusetts, United States · On-site
$100k–$182k/yr
Company Summary ProFound™ Therapeutics is a biotechnology company discovering novel proteins across the expanded human proteome to unlock first-in-class medicines and transformative drug targets. The company’s proprietar…
Skills: Cardiovascular disease biology, Metabolic disease biology, Target validation, Drug discovery, Translational biology
Cambridge, Massachusetts, United States · On-site
$120k–$193k/yr
The Company FL105 is a privately held, early-stage company pioneering the use of artificial intelligence to transform human psychological fitness and wellbeing. We are creating a platform that empowers people to build a …
Skills: Machine Learning, Reinforcement Learning From Human Feedback, Supervised Fine Tuning, Large Language Models, PyTorch
Cambridge, Massachusetts, United States · On-site
$179k–$237k/yr
Position Summary: Quotient is seeking a Director or Senior Director of Antibody Discovery. This role will define and lead Quotient’s antibody discovery strategy; leading the delivery of therapeutic antibody projects in a…
Skills: Antibody Discovery, Protein Engineering, AI/ML Design, Structure-Based Design, Project Leadership
Cambridge, Massachusetts, United States · On-site
Company Summary FL106 Inc. is a privately held, early-stage biotechnology company focused on developing novel drug delivery modalities. FL106 is backed by Flagship Pioneering, which provides the strategic vision and reso…
Skills: Flow Cytometry, Cell Isolation, In Vivo Mouse Studies, siRNA, Advanced Microscopy
Cambridge, Massachusetts, United States · On-site
$128k–$176k/yr
Who We Are Flagship Pioneering is a biotechnology company that invents and builds platform companies that change the world. We bring together the greatest scientific minds with entrepreneurial company builders and assemb…
Skills: Project Management, Cross-functional Leadership, Stakeholder Management, Risk Management, Change Management
Cambridge, Massachusetts, United States · Remote OK
$148k–$237k/yr
What if... We could harness the power of Flagship’s scientific platforms and create novel treatment options that benefit more patients, sooner? About Pioneering Medicines: Pioneering Medicines, Flagship Pioneering’s in-h…
Skills: DMPK, Biologics, Pharmacokinetics, Bioanalysis, Immunogenicity
Cambridge, Massachusetts, United States · On-site
$88k–$132k/yr
Technical Specialist – Small Molecule Intellectual Property The Company Montai Therapeutics is a privately held, biotechnology company focused on harnessing AI to decode untapped diverse chemistry to develop breakthrough…
Skills: Organic chemistry, Medicinal chemistry, Patent drafting, Prior art analysis, Intellectual property strategy
Cambridge, Massachusetts, United States · On-site
$217k–$275k/yr
Company Summary ProFound™ Therapeutics is a biotechnology company discovering novel proteins across the expanded human proteome to unlock transformative drug targets and first-in-class medicines. The company’s proprietar…
Skills: Alliance management, Program management, Portfolio management, Strategic planning, Governance
Cambridge, Massachusetts, United States · On-site
$115k–$165k/yr
About Tilde (FL110) Tilde Bio, Inc. (FL110) is building a next-generation biological sensing platform at the intersection of synthetic biology, protein engineering, nanopore biophysics, electrophysiology, signal processi…
Skills: Python, Bioinformatics, Computational biology, Biophysics, Signal processing
Cambridge, Massachusetts, United States · Hybrid
$172k–$281k/yr
Flagship Pioneering is a scientific innovation engine that invents and builds companies that change the world. We bring together the greatest scientific minds with entrepreneurial company builders and assemble the capita…
Skills: Organizational Development, Talent Management, Change Management, Leadership Development, Succession Planning
Cambridge, Massachusetts, United States · On-site
$188k–$258k/yr
ABOUT PIONEERING INTELLIGENCE Pioneering Intelligence builds on Flagship Pioneering’s legacy of founding cutting-edge science and computational ventures, harnessing recent advances in AI, machine learning, and data to ac…
Skills: Distributed Systems, Workflow Orchestration, Event-Driven Architecture, AWS, Infrastructure-as-Code
Cambridge, Massachusetts, United States · On-site
$126k–$182k/yr
Company Summary FL130 (Flagship Labs 130) is an early-stage biotechnology startup aiming to answer an ambitious and exciting question: What if… we could systematically identify bioactive peptides to inspire next-generati…
Skills: Molecular biology, Protein engineering, Membrane protein engineering, Surface display technology, Plasmid engineering
Cambridge, Massachusetts, United States · On-site
$217k–$275k/yr
Company Overview Etiome is a privately held, early-stage biotechnology company advancing a proprietary Temporal Biodynamic platform to identify and discover novel drug targets and enabling biomarkers for chronic and prog…
Skills: Corporate strategy, Business operations, Cross-functional leadership, Financial planning, Budgeting
Cambridge, Massachusetts, United States • On-site
Sign up with Clera and we'll reach out the moment a role actually fits you — no more spraying applications into the void.
Develop and optimize high-throughput automated protocols to translate biological workflows into integrated workcells. Collaborate with scientific and IT teams to ensure reliable data generation, system integration, and continuous workflow improvement.
Requires a bachelor's or master's degree in a relevant engineering or scientific field with early-career experience in laboratory automation. Proficiency in Python or C# and hands-on experience with robotic liquid-handling systems are essential.
What if you could join a rapidly growing company and play a critical role in bringing new medicines to patients by helping scale the programmable infrastructure behind a new human cellular biology platform?
Vesalius Therapeutics is pioneering a new platform to generate breakthrough treatments for common diseases. Our platform combines large-scale human genetics, genomics, stem cell studies, high-dimensional cellular phenotyping, and artificial intelligence to uncover causal biology and identify optimal intervention points for new therapies. Vesalius was founded in 2019 by Flagship Pioneering.
Vesalius is seeking a highly motivated Automation Engineer to help scale our automated biology platform. This early-career role sits at the intersection of biology, robotics, software, and data systems, with a focus on programming, data handling, systems integration, and workflow automation. You will partner with scientists, automation operators, IT, and data science teams to translate biological workflows into robust automated workcells and ensure experiments generate reliable, traceable, analysis-ready data. This role goes beyond operating instruments—it is focused on making automation programmable, integrated, scalable, and reliable.
At Flagship, we accept impossible missions to enable bigger leaps. Our core values guide us through uncertainty and toward lasting impact.
We are an equal opportunity employer. All qualified applicants will be considered for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law.
We recognize that great candidates often bring unique strengths without fulfilling every qualification. If you have some of the experience listed above but not all, please apply anyway. We are dedicated to building diverse and inclusive teams and look forward to learning more about your background and interest in Flagship.
Recruitment & Staffing Agencies: Flagship Pioneering and its affiliated Flagship Lab companies (collectively, “FSP”) do not accept unsolicited resumes from any source other than candidates. The submission of unsolicited resumes by recruitment or staffing agencies to FSP or its employees is strictly prohibited unless contacted directly by Flagship Pioneering’s internal Talent Acquisition team. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of FSP, and FSP will not owe any referral or other fees with respect thereto.
The salary range for this role is $108,000 - $170,700. Compensation for the role will depend on a number of factors, including a candidate’s qualifications, skills, competencies, and experience. Vesalius Therapeutics currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on Vesalius Therapeutics's good faith estimate as of the date of publication and may be modified in the future.
Privacy Notice for Applicants: When you apply for a role at Flagship Pioneering or one of its portfolio companies, we collect and use personal information you provide (such as your name, contact details, work history, and application materials) to evaluate your application, communicate with you, and comply with legal obligations. Your application data is processed through Greenhouse, our applicant tracking system, and may also be reviewed using AI-assisted screening tools. We do not sell your personal information. California residents have rights under the CCPA/CPRA including to know, delete, and opt out of the sharing of their personal information. If you are located in the EU or UK, we process your data under GDPR and you have rights to access, rectify, and erase your data. To exercise your rights or for questions, contact [email protected].
We are a biotechnology company that invents and builds platform companies that change the world.
Flagship Pioneering is a biotechnology company that invents and builds platform companies, each with the potential for multiple transformative human health and sustainability products. Since its launch in 2000, Flagship has originated and fostered more than 100 scientific ventures. The current Flagship ecosystem comprises over 40 companies, including Denali Therapeutics, Foghorn Therapeutics, Generate:Biomedicines, Inari, Indigo Agriculture, and Tessera Therapeutics.
Offices: 55 Cambridge Parkway, Suite 800E, Cambridge, MA 02142, US
Based on 1041 listings with disclosed salaries, most science & research jobs in Cambridge, MA pay between $94k–$270k per year. Individual offers vary with seniority, company size, and specialization.
There are currently 1,266 open science & research positions in Cambridge, MA listed on Clera. New openings are added daily as companies post roles.
Companies currently hiring include Novartis, Draper, Harvard Division of Medical Sciences, Sanofi, Flagship Pioneering, among others. Browse the listings above to see every active employer.
Yes — 497 of the 1266 open science & research positions offer remote or hybrid work (54 remote, 443 hybrid).
Each listing links directly to the employer's application page. Apply early — fresh listings get the most recruiter attention in the first two weeks.
